Characterization of the allele pool of Siberian sturgeon (Acipenser baerii B.) bred in Russia using an optimized multiplex panel of microsatellite loci
Main Article Content
Abstract
Article Details
References
Бардуков Н.В. и др. Разработка мультиплексной панели микросателлитов для генетической пас-портизации сибирского осетра (Acipenser baerii) // Сельскохозяйственная биология. 2023. Т. 58, № 6. С. 1057–1067. DOI: 10.15389/agrobiology.2023.6.1057rus. EDN: OVCXZR.
Бардуков Н.В. и др. Методические рекомендации по проведению молекулярно-генетической экс-пертизы племенного материала сибирского осетра (Acipenser baerii), разводимого в товарной аквакуль-туре. Дубровицы, 2024. 32 с. EDN: AYMFAS.
Барминцева А.Е. Филогеография и внутривидовой генетический полиморфизм сибирского осетра Acipenser baerii Brandt, 1869 в природе и аквакультуре: автореф. дис. ... канд. биол. наук. М., 2018. 19 с. EDN: CBMUZY.
Барминцева А.Е., Мюге Н.С. Использование микросателлитных локусов для установления видовой принадлежности осетровых (Acipenseridae) и выявления особей гибридного происхождения // Генетика. 2013. Т. 49, № 9. С. 1093–1105. DOI: 10.7868/S0016675813090038.
Малютин B.C., Рубан Г.И. К истории рыбоводного освоения сибирского осетра Acipenser baerii реки Лена для целей акклиматизации и товарного выращивания // Вопросы ихтиологии. 2009. Т. 49, № 3. С. 389–395. EDN: KFPGFX.
Рубан Г.И. Адаптивные эколого-морфологические особенности сибирского осетра (Acipenser baerii Brandt) // Биология внутренних вод. 2019. № 2-1. С. 71–78. DOI: 10.1134/S032096521902013X.
Синтол [Электронный ресурс]. URL: https://www.syntol.ru/catalog/reagenty-dlya-geneticheskikh-analizatorov/genekspert-osyetr.html
Bruvo R. et al. A simple method for the calculation of microsatellite genotype distances irrespective of ploidy level // Molecular Ecology. 2004. Vol. 13(7). P. 2101–2106. DOI: 10.1111/j.1365-294X.2004.02209.x. EDN: FPAHDJ.
Chandra G., Fopp-Bayat D. Trends in aquaculture and conservation of sturgeons: a review of molecular and cytogenetic tools // Reviews in Aquaculture. 2021. Vol. 13. P. 119–137. DOI: 10.1111/raq.12466.
Clark L.V., Jasieniuk M. Polysat: an R package for polyploid microsatellite analysis // Molecular Ecology Resources. 2011. Vol. 11. P. 562–566. DOI: 10.1111/j.1755-0998.2011.02985.x.
Clark L.V. Polysat version 1.7 Tutorial Manual / University of Illinois at Urbana-Champaign, Depart-ment of Crop Sciences, 2019. URL: https://github.com/lvclark/polysat/wiki (дата обращения: 04.09.2025).
Georgescu S. et al. Characterization of five microsatellites in the Siberian sturgeon Acipenser baerii from aquaculture // Journal of Animal Science and Biotechnology. 2013. Vol. 46. P. 95–98.
Hardy O., Vekemans X. SPAGeDI: A versatile computer program to analyse spatial genetic structure at the individual or population levels // Molecular Ecology Notes. 2002. Vol. 2. P. 618–620. DOI: 10.1046/j.1471-8286.2002.00305.x.
Hu Y. et al. Development and characterization of novel cross–species tetranucleotide microsatellite markers for sterlet (Acipenser ruthenus) from Chinese sturgeon (Acipenser sinensis) / Chinese Sturgeon Research Institute. Yichang, 2019. P. 3–10.
Kalia R.K. et al. Microsatellite markers: an overview of the recent progress in plants // Euphytica. 2011. Vol. 177. P. 309–334. DOI: 10.1007/s10681-010-0286-9.
Kohlmann K. et al. New microsatellite multiplex PCR sets for genetic studies of the sterlet sturgeon, Acipenser ruthenus // Environmental Biotechnology. 2017. V. 13. P. 11–17.
Kohlmann K. et al. Validation of 12 species-specific, tetrasomic microsatellite loci from the Russian stur-geon, Acipenser gueldenstaedtii, for genetic broodstock management // Aquaculture International. 2018. Vol. 26. P. 1365–1376. DOI: 10.1007/s10499-018-0290-y.
Liu Y. et al. Paternity assignment in the polyploid Acipenser dabryanus based on a novel microsatellite marker system // PLoS One. 2017. Vol. 12(9). Art. e0185280. DOI: 10.1371/journal.pone.0185280.
Panagiotopoulou H. et al. Microsatellite multiplex assay for the analysis of Atlantic sturgeon populations // Journal of Applied Genetics. 2014. Vol. 55(4). P. 505–510. DOI: 10.1007/s13353-014-0216-y.
Pritchard J.K., Wen W. Documentation for structure software: Version 2. Department of Human Genetics, University of Chicago, 2002. URL: http://pritch.bsd.uchicago.edu.
Rajkov J., Shao Z., Berrebi P. Evolution of Polyploidy and Functional Diploidization in Sturgeons: Mi-crosatellite Analysis in 10 Sturgeon Species // Journal of Heredity. 2014. Vol. 105, iss. 4. P. 521–531. DOI: 10.1093/jhered/esu027.
Ruban G.I. Geographical Distribution, Ecological and Biological Characteristics of the Siberian Sturgeon Species // The Siberian Sturgeon (Acipenser baerii, Brandt, 1869). Vol. 1. Biology / ed. by P. Williot, G. Nonnotte, D. Vizziano-Cantonnet, M. Chebanov. Springer, Cham, 2018. DOI: 10.1007/978-3-319-61664-3_1.
Shivaramu S. et al. Ploidy Levels and Fitness-Related Traits in Purebreds and Hybrids Originating from Sterlet (Acipenser ruthenus) and Unusual Ploidy Levels of Siberian Sturgeon (A. baerii) // Genes. 2020. Vol. 11(10). Art. 1164. DOI: 10.3390/genes11101164.
SplitsTree6. URL: https://software-ab.cs.uni-tuebingen.de/download/splitstree6/welcome.html.
Toth G., Gaspari Z., Jurka J. Microsatellites in different eukaryotic genomes: survey and analysis // Ge-nome Research. 2000. Vol. 10(7). P. 967–981. DOI: 10.1101/gr.10.7.967.
Wang J. et al. Developing microsatellite duplex PCR reactions for sterlet (Acipenser ruthenus) and their application in parentage identification // Scientific Reports. 2022. Vol. 12. Art. 12036. DOI: 10.1038/s41598-022-16194-3
Williot P. et al. (eds.) The Siberian Sturgeon (Acipenser baerii, Brandt, 1869). Vol. 1. Biology / Springer In-ternational Publishing, 2018. 497 p. DOI: 10.1007/978-3-319-61664-3.
Yang S. et al. Identification of Hybrid Sturgeon (Acipenser baerii × Acipenser schrenckii) from Their Par-ents Using Germplasm // Animals. 2025. Vol. 15(7). Art. 907. DOI: 10.3390/ANI15070907.